Publications

  1. Gerardo Chowell, Amanda Bleichrodt, Ruiyan Luo (Accepted) Parameter estimation and forecasting with quantified uncertainty for ordinary differential equation models using QuantDiffForecast: A MATLAB toolbox and tutorial. Statistics in Medicine.
  2. Ruiyan Luo and Xin Qi. (2023) General Nonlinear Function-on-Function Regression via Functional Universal Approximation . Journal of Computational and Graphical Statistics. Code
  3. Ruiyan Luo and Xin Qi (2023) Nonlinear Function-on-Scalar Regression via Functional Universal Approximation . Biometrics. Code
  4. Ruiyan Luo and Xin Qi. (2023) Modeling spiky functional data with derivatives of smooth functions in function-on-function . Statistica Sinica 33:819-850. Code
  5. A. B. Smirnova, B. D. Pidgeon, Ruiyan Luo (2022) On Stable Parameter Estimation and Short-term Forecasting with Quantified Uncertainty for COVID-19 Transmission . Journal of Inverse and Ill-Posed Problem (JIIP).
  6. Ruiyan Luo and Xin Qi (2021) Functional regression for densely observed data with novel regularization. Journal of Computational and Graphical Statistics 30(1): 220-235. Code
  7. Xin Qi, and Ruiyan Luo. (2019) Nonlinear additive function on function with multiple predictor curves Statistica Sinica 29: 719-739.
  8. Ruiyan Luo and Xin Qi. (2018) Interaction model and model selection for function-on-function regression Journal of Computational and Graphical Statistics . DOI: 10.1080/10618600.2018.1514310
  9. Xin Qi, and Ruiyan Luo. (2018) Function on function regression with thousands of predictive curves Journal of Multivariate Analysis 163: 51-66. Code
  10. Luo, Ruiyan, and Xin Qi. (2017) Asymptotic optimality of sparse linear discriminant analysis with arbitrary number of classes Scandinavian Journal of Statistics 44(3): 598-616.
  11. Luo, Ruiyan, and Xin Qi (2017) Function-on-function linear regression by signal compression Journal of American Statistical Association. 112(518): 690-705. Code
  12. Luo, Ruiyan, and Xin Qi. (2017) Signal extraction approach for sparse multivariate response regression. Journal of Multivariate Analysis. 153: 83–97. Code
  13. Luo, Ruiyan, and Xin Qi. (2016) Functional wavelet regression for function-on-function linear models. Electronic Journal of Statistics. 10(2): 3179-3216. Supplementary material  Code
  14. Praveen Mannam, Navin Rauniyar, TuKiet T. Lam, Ruiyan Luo, Patty J Lee, Anup Srivastava. (2016) MKK3 influences mitophagy and is involved in cigarette smoke induced COPD.Free Radical Biology and Medicine 101: 102-115
  15. Cooper, Hannah LF, Loida Bonney, Ruiyan Luo, Danielle F. Haley, Sabriya Linton, Josalin Hunter-Jones, Zev Ross, Gina M. Wingood, Adaora A. Adimora, and Richard Rothenberg (2016) Public Housing Relocations and Partnership Dynamics in Areas With High Prevalences of Sexually Transmitted Infections Sexually Transmitted Diseases 43(4): 222-230
  16. Linton, Sabriya L., Hannah LF Cooper, Ruiyan Luo, Conny Karnes, Kristen Renneker, Danielle F. Haley, Emily F. Dauria et al. (2016) Changing places and partners: associations of neighborhood conditions with sexual network turnover among African American adults relocated from public housing. Archives of Sexual Behavior. 1-12.
  17. Li, Shuzhao, Andrei Todor, and Ruiyan Luo (2016) Blood transcriptomics and metabolomics for personalized medicine. Computational and Structural Biotechnology Journal. 14: 1-7.
  18. Luo, Ruiyan, and Xin Qi (2015) Sparse wavelet regression for multiple predictive curves. Journal of Multivariate Analysis. 134: 33-49.
  19. Qi, Xin, and Ruiyan Luo (2015) Sparse principal component analysis in Hilbert space. Scandinavian Journal of Statistics. 42: 270-289.
  20. Linton, Sabriya L., Hannah LF Cooper, Ruiyan Luo, Conny Karnes, Kristen Renneker, Danielle F. Haley, Josalin Hunter-Jones, Zev Ross, Loida Bonney, and Richard Rothenberg. (2015) People and places: relocating to neighborhoods with better economic and social conditions is associated with less risky drug/alcohol network characteristics among African American adults in Atlanta, GA. Drug and Alcohol Dependence.
  21. Qi, Xin, Ruiyan Luo, Raymond J. Carroll, and Hongyu Zhao (2015) Sparse regression by projection and sparse discriminant analysis. Journal of Computational and Graphical Statistics. 24(2): 416-438.
  22. Zhu, Meiying, Jiang Li, Zhiyuan Li, Wei Luo, Dajun Dai, Scott R. Weaver, Christine Stauber, Ruiyan Luo, and Hua Fu (2015) Mortality rates and the causes of death related to diabetes mellitus in Shanghai Songjiang District: an 11-year retrospective analysis of death certificates. BMC Endocrine Disorders: 15:45.
  23. Chen, Zhengjia,  Ye Cui, Taofeek K Owonikoko, Zhibo Wang, Zheng Li, Ruiyan Luo, Michael Kutner, Fadlo  R Khuri , Jeanne Kowalski (2014) Escalation with Overdose Control using All Toxicities and Time to Event Toxicity Data in Cancer Phase I Clinical Trials. Contemporary Clinical Trial. 37(2): 322-332.
  24. Qi, Xin, Ruiyan Luo and H. Zhao (2013) Sparse principal component analysis by choice of norm. Journal of Multivariate Analysis. 114: 127-160.
  25. Nucci, Anita M., Caitlin Sundby Russell, Ruiyan Luo, Vijay Ganji, Flora Olabopo, Barbara Hopkins, Michael F. Holick, and Kumaravel Rajakumar (2013) The Effectiveness of a Short Food Frequency Questionnaire in Determining Vitamin D Intake in Children. Dermato-Endocrinology. 5(1): 1-6.
  26. Luo, Ruiyan and Hongyu Zhao (2012) Protein quantitation using iTRAQ: review on the sources of variations and analysis of nonrandom missingness. Statistics and Its Interface. 5(1): 99-107.
  27. Luo, Ruiyan and Hongyu Zhao (2011) Bayesian hierarchical modeling for signaling pathway inference from single cell interventional data. Annals of Applied Statistics. 5(2A): 725-745. Code
  28. Davalos, Alberto, Carlos Fernandez-Hernando, Grzegorz Sowa, Behrad Derakhshan, Michelle I. Lin, Ji Y. Lee, Hongyu Zhao, Ruiyan Luo, Christopher Colangelo, and William C. Sessa (2010) Quantitative proteomics of caveolin-1 regulated proteins: Characterization of PTRF/Cavin-1 in endothelial cells. Molecular & Cellular Proteomics. 9(10): 2109-2124.
  29. Luo, Ruiyan, Christopher M. Colangelo, William C. Sessa, and Hongyu Zhao (2009) Bayesian analysis of iTRAQ data with nonrandom missingness: identification of differentially expressed proteins. Statistics in Biosciences. 1(2): 228-245. Code
  30. Luo, Ruiyan and Bret Larget (2009) Modeling substitution and indel processes for AFLP marker evolution and phylogenetic inference. Annals of Applied Statistics. 3(1): 222-248. Code
  31. Luo, Ruiyan, Andrew L. Hipp, and Bret Larget (2007). A Bayesian model of AFLP marker evolution and phylogenetic inference.
    Statistical Applications in Genetics and Molecular Biology. 6, Article 11.
  32. Yang, Xiaoguang, Ruiyan Luo, and Zhiping Feng (2007) Using amino acid and peptide composition to predict membrane protein types. Biochemical and Biophysical Research Communications. 353(1): 164-169.
  33. Luo, Ruiyan, Zhiping Feng, and Jiakun Liu. (2002) Prediction of protein structural class by amino acid and polypeptide composition. European Journal of Biochemistry. 269: 4219-4225.
  • Luo, Ruiyan, and Xin Qi. Sparse Fisher’s discriminant analysis with thresholded linear constraints. (submitted)